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NEXTFLEX Rapid XP V2 DNA-Seq Kit for Metagenomics

The NEXTFLEX™ Rapid XP v2 DNA-Seq Kit for Metagenomics offers fast, fragmentation-based library prep for whole genome sequencing of microbial communities for sequencing on Illumina® and Element® platforms. Libraries are ready in ~ 2.5 hours, and proprietary normalization beads eliminate the need for quantitation or manual pooling. The protocol supports 100 pg to 1 µg input, with a PCR-free option at ≥ 250 ng. Purchase includes access to Cosmos-Hub® , providing validated pipelines for WGS metagenomics analysis, including taxonomic and functional outputs. 
Feature Specification
Automation Compatible Yes
Product Group DNA-seq
The NEXTFLEX™ Rapid XP v2 DNA-Seq Kit for Metagenomics offers fast, fragmentation-based library prep for whole genome sequencing of microbial communities for sequencing on Illumina® and Element® platforms. Libraries are ready in ~ 2.5 hours, and proprietary normalization beads eliminate the need for quantitation or manual pooling. The protocol supports 100 pg to 1 µg input, with a PCR-free option at ≥ 250 ng. Purchase includes access to Cosmos-Hub® , providing validated pipelines for WGS metagenomics analysis, including taxonomic and functional outputs. 
Product variants
Unit Size: 8 rxns
Analysis
Metagenomics Analysis Included
Part #:
NOVA-5149-21S
List price
USD 608.00
Your online price:
Unit Size: 48 rxns
Analysis
Metagenomics Analysis Included
Part #:
NOVA-5149-22S
List price
USD 3,599.00
Your online price:
Unit Size: 96 rxns
Analysis
Metagenomics Analysis Included
Part #:
NOVA-5149-23S
List price
USD 7,113.00
Your online price:
For research use only. Not for use in diagnostic procedures.

Overview

The NEXTFLEX Rapid XP v2 DNA-Seq Kit for Metagenomics combines fast, automation-ready library prep with built-in normalization and integrated downstream analysis. Designed for whole genome sequencing of microbial communities, purchase includes access to Cosmos-Hub®
for streamlined WGS metagenomics interpretation.

  • Single-tube enzymatic fragmentation, end-repair & A-tailing. Libraries in as little as 2.5 hours
  • PCR-free option for ≥250 ng input; full 100 pg–1 µg input range with amplification
  • Integrated NEXTFLEX normalization beads, skip post-library quantitation and pooling
  • Validated Cosmos-Hub access for taxonomic and functional WGS metagenomics analysis
  • CHAMP and KEPLER pipelines support version-controlled, reproducible reporting
  • Up to 1,536 UDIs available for high-throughput multiplexing
  • Automation-validated on Revvity Sciclone™ and Zephyr™ NGS platforms
  • Compatible with Illumina® and Element® sequencing platforms 

Additional product information

Analysis Powered by Cosmos-Hub®

The purchase of the NEXTFLEX Rapid XP v2 DNA-Seq Kit for Metagenomics includes access to Cosmos-Hub®, a secure, cloud-based analysis platform for WGS metagenomics. Cosmos-Hub® enables taxonomic and functional profiling, antimicrobial resistance (AMR) gene detection, and microbiome diversity metrics, all through version-controlled pipelines.

Key features:

  • Taxonomic and functional profiling of microbial communities
  • AMR gene detection and resistome summaries
  • Alpha/beta diversity analysis and rich data visualizations
  • Cloud access, no local infrastructure needed

If you are evaluating when to use WGS rather than amplicon approaches, start with our short blog on functional characterization of microbial communities through WGS. It explains why WGS supports both species resolution and pathway-level insights, which pairs well with KEPLER and CHAMP outputs.

KEPLER™ Host-Agnostic Microbiome Profiler

KEPLER™ Profiler delivers host-independent microbiome analysis using curated reference databases. It supports diverse sample types, without linking reads to specific hosts, making it ideal for environmental and nonclinical metagenomics.

Benefits of KEPLER™ Profiler:

  • Host-agnostic profiling across sample types
  • Supports taxonomic and functional output
  • Over 30,000 genomes for microbial classification
KEPLER profiler: genome database, multi kingdom (30,000+ species), host agnostic, strain level, fast, patented.


Figure 1: KEPLER™ Profiler provides host-agnostic, multi-kingdom metagenomic profiling with curated reference databases, 30,000+ species coverage, strain-level placement, fast run times, patented methods, and a literature base of 600+ citations.

CHAMP™ Human Microbiome Profiler

CHAMP™ Profiler offers targeted profiling for human-associated microbiota using a validated marker gene approach. Ideal for clinical, translational, and biotech studies, CHAMP™ Profiler delivers high-resolution insights into microbial abundance, structure, and function.

Benefits of CHAMP™ Profiler:

  • Enhanced detection of human-associated microbes
  • Enables high-resolution taxonomic and functional profiling
CHAMP™ benchmarks: CAMI recall +16% vs MetaPhlAn4; NIBSC false signal ~0.01% (~400× lower) vs other profilers.


Figure 2: CHAMP™ benchmark performance. CAMI shows 16% higher recall (sensitivity) vs MetaPhlAn 4. NIBSC panel shows ~400× lower false signal (~0.01%) vs other profilers.

Highly Efficient Ligation with Low Adapter Formation

The NEXTFLEX Rapid XP v2 DNA-seq Kit for Metagenomics is designed to provide exceptional ligation efficiency, which is crucial for high-quality sequencing results. The kit includes optimized reagents and protocols that ensure the efficient and accurate ligation of DNA fragments. This high ligation efficiency reduces the likelihood of adapter dimers or erroneous sequences even at low input concentrations, leading to more reliable and reproducible data. By maximizing the ligation step, the kit enhances overall workflow efficiency and contributes to the generation of high-quality sequencing libraries.

Included Normalization Beads provide highly consistent results while saving you several hours of time while preparing for sequencing

Normalization Beads offer significant benefits in DNA sequencing workflows by ensuring consistent and accurate sample preparation. They streamline the process by equalizing the concentration of DNA across different samples, which reduces variability and enhances the reliability of sequencing results. This leads to more efficient and cost-effective sequencing, as it minimizes the need for additional normalization steps and reduces the risk of errors. Overall, Normalization Beads contribute to higher quality data and more reproducible outcomes.

Flexible Multiplexing options

Barcodes are not supplied with the NEXTFLEX Rapid XP DNA-seq kit v2 for Metagenomics and need to be purchased separately. We offer 384 color-balanced NEXTFLEX UDI adapters that improve multiplexing capabilities for both low-level and high-level multiplexing needs and a set of 1,536 NEXTFLEX UDI adapters for ultra high-throughput applications.

Automation Compatibility

The NEXTFLEX Rapid XP V2 DNA-Seq kit is compatible with multiple liquid handlers, including the Sciclone G3 NGSx workstation, Sciclone G3 NGSx iQ™ workstation, and Zephyr NGS workstation

Listen to the experts.

Watch Britton Strickland, Ph.D., and Gustav Lindved in the webinar, Advanced, End-To-End Shotgun Metagenomics Workflows, as they introduce the Cosmos-Hub and how it enables the understanding of the functional roles of microbes in various environments.

revvity metagnomics


Revvity Shotgun Metagenomic Sequencing Analysis - Online Demonstration

Now you can schedule a one-on-one 30-minute online demonstration that will cover everything you need to know about the Cosmos-Hub® which is now available with Revvity’s NEXTFLEX™ Rapid XP V2 DNA-Seq kit for Metagenomics. You will be able to see the analysis demonstrated and our experts will be able to answer any questions that you may have. Please choose a timeframe that suits you best and we will provide you a Microsoft Teams personal link to join when the time comes. We look forward to speaking with you.

Specifications

Analysis
Metagenomics Analysis Included
Automation Compatible
Yes
Product Group
DNA-seq
Shipping Conditions
Dual Temperature
Unit Size
8 rxns

FAQs

  • How long does library prep take with the NEXTFLEX Rapid XP DNA-seq kit v2 for Metagenomics?
  • Do I still need mechanical shearing or tagmentation?
  • What DNA input range is supported, and when can I skip PCR?
  • How do Normalization Beads save time?
  • What level of adapter-dimer formation should I expect?
  • Do I still use Normalization Beads if I follow the PCR-free Protocol? 

Resources

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End-to-end whole genome sequencing metagenomics solutions

This flyer describes Revvity and Cosmos-Hubs solution for WGS for metagenomics.

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